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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… together, learned from JGI’s Nikos Kyrpides that his Microbiome Data Science group was also working on RNA virus … This is also the type of synergistic and collaborative community spirit that the JGI advocates for and actively … metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then …
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Natural Prodcast Episode 8: Eric Schmidt
… today who I have a very personal connection to. So our “target” today is Eric Schmidt, who’s a professor at the … rich and underappreciated. And we’ve worked both with the microbiome. So, with symbiotic bacteria that live in animals … do you think it was about that? What factors led to the community – not necessarily competing, but – sort of, diving …
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CSP Large Scale Call
The Community Science Program Large Scale Call is focused on … to unravel functional capabilities of plants, microbes and microbial communities, global carbon and nutrient cycling, … bioenergy-related feedstock crops or model plants. Projects targeting marine systems must clearly demonstrate relevance …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice … user meeting. The UEC also acts as a liaison to the user community and the broader scientific community, and promotes communication and collaboration within the user community. …
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Natural Prodcast Episode 7: Ben Shen
… as a new type of medicine that will open up a new year for targeted anti cancer drug discovery. DAN: Yeah, great. Are … not only I say we were able to make use of it, but also the community can benefit from the technology. But even better, … genomic revolution, to me, as a natural part chemist for microbial natural product, is that I love microbial natural …
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Data Ecosystem
… will be the development of tools and infrastructure for microbiome data science, and the development of new … subject area. … The NMDC is tackling existing gaps in microbiome science through distributed data infrastructure … The NMDC seeks to connect and engage the microbiome community to unlock new possibilities in microbiome data …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… on a pilot project with biology students from Boca Raton Community High School in Palm Beach County, Florida. The … the latest molecular techniques to learn more about the microbial communities in the Arthur R. Marshall Loxahatchee … Their data report, which provides the only known reference microbiome data sets for the Loxahatchee Refuge,  was …
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Single Cell Research Group
… of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate … in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … N. N., Kelly W. J. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat …
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Natural Prodcast Episode 2: The Primer, Part 2
… of those pathways come from bacteria that actually live within, say, the sponges or other things. And we know lots more about microbiomes and symbionts that live with other organisms, … to be a problem. Many of these molecules, too, hit the same target. And so there’s always a need to find new antibiotics …
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Natural Prodcast Episode 9: Roger Linington
… one question about one class of molecules or one particular target, we’re now very much – we’re interested in how we can … to try and create an open source database of all known microbial natural products. So if you think about natural … in that set, and how those unique molecules are distributed within the set, then it would be a lot easier to start to …
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New Lineages of Life Group
… coding potential to find novel functions that may impact microbiome structure and biogeochemical cycles. Research … Towards a balanced view of the bacterial tree of life. Microbiome. 5 (1), 1-6 Schulz et al. (2017) Giant viruses …
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Who We Are
… as the DOE Systems Biology Knowledgebase and the National Microbiome Data Collective.        … Learn more about our …
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