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JGI@25: Cow Rumen and the Early Days of Metagenomics
… to more sustainable energy production.  However, less than 10% of the microbes found in any environment can be grown in … laboratory — and rumen microbes are no exception. Back in 2011, JGI-supported researchers published a paper in the … You can learn more about how JGI data supports higher education in this JGIota , a Genome Insider podcast …
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … We hope to add several of them soon, but don’t yet have a timeline for their restoration. They include Jalview (for …
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Game On: High School Students Drive Everglades Metagenomics Study
… her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year A-Level Advanced International Certificate of Education (AICE) Biology class at Florida’s Boca Raton … of their efforts during the Energy, Earth and Environmental Education (E4) community-building workshop at the  2019 …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… led the team to identify a gene called Less Shattering 1 (SvLes1); gene editing studies led by co-first author Pu Huang … and assembled the green millet “pan-genome” (a set of 51,000 genes that represent all the genes that are present in … the human condition through plant science. Research, education and outreach aim to have impact at the nexus of …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute … teaches the A-Level Advanced International Certificate of Education (AICE) Biology class at Boca Raton Community High … real-time, video-conferenced seminars with the class. The 18 students organized and conducted a field trip, armed with …
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Marine Microbe Contains Multitudes
… Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii … they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial … K. Inouye Center for Microbial Oceanography: Research and Education. …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… U.S. Department of Energy under Contract No. DE-AC02-05CH11231. The work was supported by Pacific Northwest National … National Science Foundation Integrative Graduate Education and Research Traineeship Program, and Montana …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… reference fungal genome sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, … fungal enzymes actually outnumbered bacterial enzymes 3-to-1. Additionally, the fungal enzymes the team found suggest … Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth and Sports of the Czech Republic …
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Trent Northen
… Joint BioEnergy Institute and the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to … in Metabolomics, The Scripps Research Institute Executive Education, UC Berkeley Haas School of Business DOE … starvation modulate root exudation. Science Advances, 2024 10(1), Schadt, C., Martin, S., Carrell, A. et al. An …
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Steven Wilson
… Since 2018, Mr. Wilson has served as the Systems Engineering Group … Warehouse and Software Quality Assurance teams from April 2012 to 2018.        … Education …
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Atif Shahab
… Since 2012, Mr. Shahab has led the development of an integrated … Education …
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Hiroshi Otani
… Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in … RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005. Otani H, Udwary DW, Mouncey NJ. Comparative and … Education …
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