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… The JGI is leveraging its current partnerships to offer new … Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … and characterizing microbial diversity, work in the Metagenome Program uses several experimental approaches to … The Metagenome Program focuses on the high-throughput sequencing of …

… Genome Institute and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … check it out. You can get more info at usermeeting.jgi.doe.gov . And I’ll be sure I put that link in the show … Our guest on this episode is Dr. Nigel Mouncey , JGI’s Director, and also lead of the JGI’s Secondary …

… As a National User Facility, the JGI serves more than 2,500 users that predominately come … leading industry and academic organizations with the DOE, National Laboratories, and User Facilities — as well as … accessible, AI-ready large-scale data repositories for genome information with analysis tools for mining and …

… The JGI’s DNA Synthesis Program supports a wide range of … scientists to drive innovations that align with DOE's missions. … energy and environmental challenges, aligning with the DOE's vision for a sustainable, bio-based economy. … and characterizing enzymes and pathways vital to DOE missions. Using bioinformatics tools and genome portals, …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … of genome scientists and recruit new talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions … microbial genome and microbiome datasets. It includes JGI-sequenced and publicly available datasets encompassing …

… All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … The UEC represents the JGI user community and is responsible for providing input … on JGI policies and practices that affect users and their science including technical capabilities offered, proposal …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … measurements ( Who is active when/where, and how? ). The JGI Viral Genomics group attempts to address this question …

… cultivated representatives. The “Great Plate-Count Anomaly” first described by Stanley and Konopa in 1985, which highlights our skewed understanding of microbial metabolism … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to …

… Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi, … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, … to your cell wall, then the antibiotic, you know, doesn’t affect it anymore. And so all of those antibiotics …

… Natural Prodcast, a podcast about natural products and the science and scientists of secondary metabolism. Welcome … was fascinating, I think. DAN UDWARY: Yeah, and that was a JGI Community Sequencing Project. You’re right, yeah. NADINE … outside my yard or so. Also, what we wanted to look at is, does it make a difference if I go today and tomorrow? Can I …

… I didn’t know how to get towards that.  Organic chemistry doesn’t really help with getting to something other than the … do when you’re exploring your systems. Because I think the JGI has a little bit of a different approach. We don’t … we talked and I’ve noticed that you stay focused on the science and I think that’s great. But I spend a lot of time …