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… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples … of sequencing data for synthesis. This agreement, required by the DOE for all work performed in its User Facilities, is … must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix …

… we don’t recognize, because the only way to find things is by comparison. We’ll talk about that when we talk about … so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … have that goal. That’s not as much our goal here at the JGI – we are not a medicinally focused organization. And so, …

… of this policy is to establish communication norms around JGI contributions, ensure that all contributors to a … research project are appropriately recognized and credited for their work, while also adhering to the authorship … is published. The JGI expects that the data produced by the facility result in scientific publications. JGI users …

… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … hard it was – it felt kind of like training for a marathon by running at a high altitude! And a lot of us moved on to … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have …

… around us. And we actually don’t know a lot about them by their mate, what their role in nature, how have they been … it worked pretty well. DAN UDWARY: No, they were very high quality. Yeah, for sure. NADINE ZIEMERT: Yeah, Dan… it’s a … even in primary metabolism or in certain snips of viruses or something. I don’t know. Then I think making sure …

… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, … in this group expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic …

… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book … effort would be far more effective in achieving higher quality results compared to smaller individual efforts. This … The team used all the publicly available metatranscriptome datasets from the JGI’s Integrated Microbial Genomes & …

… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot … with my boss, JGI Director Nigel Mouncey. DAN: I’ll start by saying this is the first in-person recording that I’ve … a lot of sequencing capacity. And if people can get us good quality DNA, we can whip them through pretty quick.  DAN: So …

… the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … to establish with our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of Conduct. …

… episode we recorded. You’ll probably notice that the audio quality isn’t as good as what you’ll hear in other episodes, … more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s presentation from the 2019 JGI … Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his …

… JGI Mission As a U.S. Department of Energy Office of Science … program, plays a central role in advancing this frontier by supporting the scientific foundations that drive … and AI-driven analyses that convert biological information into actionable insights and solutions. …

… Biodiversity Groups, and it’s this great program funded by the National Institutes of Health and the National … that most entries were looked at more at once, and so the quality – the data quality – was reasonably high. And yeah, … resources which provide large, high quality, well curated datasets upon which to base those sorts of tools. So I think …