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Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some … metabolomics, and natural products in plants, fungi, and microorganisms. If you want to collaborate, let …

… of it. So it wasn’t only chemistry or only biochemistry or genetics. It was also ecology. It was also evolution. It was … a marine actinomycete bacterium. So they look kind of like fungi but also make these mycelia. They kind of look like … is kind of like– Dan, do they look like a mold, like a fungi or so? DAN UDWARY: Not really. They’re usually a …

Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of Microbial Ecology . Trends Microbiol. …

The Community Science Program (CSP) provides the scientific community at large with access … of disciplines. Three calls fall under the umbrella of our CSP: The Large Scale call is for expansive projects that … the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at …

Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced … and to conduct comparative and genome-centric analyses of fungi and community annotation. … Phytozome is the JGI's …

ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … in the earlier primers. In bacteria, at least, and in most fungi, biosynthetic gene clusters, which are the genes that … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no genetic tools enabling heterologous expression and functional exploration.  The developed …

Nature Reviews Microbiology 20 (5), 255-255 Schulz et al. (2020) Giant virus diversity and host interactions through … metagenomics. Nature. 578 (7795), 432-436 Schulz et al. (2020) Advantages and limits of metagenomic assembly and …

… at the JGI; and overview of the Community Science Program (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of …

… natural chemical compounds that you find in plants, fungi and bacteria, basically all living things. When your … what we’re calling a Primer. We wanted to try and give a general audience some of the basics of natural products … at least before they were ground up into coffee – bacteria, fungi, you know everything. These are shared pathways for …

… while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for …

Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among … Biotechnology.  The work also led researchers to identify a gene related to seed dispersal in wild populations for the … genomes of Dothideomycetes, the largest class of fungi, by lifestyles. Additionally, as part of an …