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… performance computing (HPC) and data analysis.  The DOE Systems Biology Knowledgebase ( KBase ) integrates systems biology data and tools to help predict biological …

… useful! DAN: Among many other things, Ben is maybe best known as an expert in enediynes – that’s a class of natural … well. One is to do DNA sequencing. So upon sequencing many genomes, now we don’t have to, as in the past, go randomly … to have an index. You have to have the computer-searching systems. So one of the enabling technologies we wanted to do …

… for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI though not … in microbial genomics, metagenomics, and computational biology, and to empower them with the knowledge and skills …

… users have access to cutting-edge capabilities to help advance their science by generating data in three …

Biology is currently experiencing a revolution brought on by … data, coupled with recent computational technology advances in management, processing and visualization of “big … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science …

… chemical biology, a lot of which people classify as tool building. So I worked with a really great guy named Matt … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that … forms which is the form that uses these compounds that are known as acyl homoserine lactones. So again, podcast format …

… consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is to: … Myco-Ed has:  ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ … and potential applications. … The Department of Energy Systems Biology Knowledgebase (KBase) is involved in the …

… by their native hosts. We are developing cell-free based systems to express BGCs that alleviate the constraints of … exploring  Escherichia coli and  Streptomyces lysate systems. Deciphering regulatory networks of secondary … factors and determine their binding sites across multiple genomes. Computational prediction of heterologous …

… how to use our data portals here.  … … Shining a Light: Advanced Photon Source Capabilities for FICUS Research shows researchers how to tap into the capabilities of the Advanced Photon Source when applying to the FICUS call. …

… yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and … obligate marine. There’s so far no species or no strains known that really grow in freshwater. But they’re actually … protein or the genes that you are analyzing. And then we’re building phylogenies a lot, making phylogenetic trees, and …

… and functional genomics data types as well as in advanced assembly and engineering strategies for DNA … of publications and allowing connections between all systems to maximize the impact of user research. The crucial … Genome Portal Navigate to the JGI Genome Portal . Click "Advanced Search" next to the search bar. Using the "Search …

… have Francisco Barona-Goméz, or Paco, as he prefers to be known among friends in natural products. He’s from Langebio … for a long time about the evolution and natural products systems. This conversation came about because he challenged … it is more related to what JGI does, which is sequence genomes. And we just published last year in the Nature …