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Natural Prodcast Episode 24: Jackie Winter and SMC
… you’ll be hearing about microbiology and natural products from the Great Salt Lake, and you’re going to learn, like … to name at JGI for the last two years or so. SMC is now released and ready for the public to tear it up. I’m super … DAN UDWARY: Nothing to be sorry about. Yeah, no, your project was really cool. The vanadium haloperoxidases are …
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Natural Prodcast Episode 2: The Primer, Part 2
… the sponges or other things. And we know lots more about microbiomes and symbionts that live with other organisms, … Frankia . And so the Frankia are bacteria that live in the root nodules of plants. And these guys were sequenced, and … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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Special Initiatives & Programs
… with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … This center concentrates on “model” crops of rice and Arabidopsis, in the search for game-changing breakthroughs … resources for genomic research and sequence-based science.  Projects include de novo generation of genome data, …
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Natural Prodcast Episode 4: Nancy Keller
DAN: Welcome back to Natural Prodcast! This is episode 4! From here on out, for a while, we’re going to be presenting … they deserve. They are so exciting. I get frustrated. Like microbiomes  – you know how that’s a big deal now. You go to … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … Inventory of Composable …
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Partnerships: Adopt-A-Genome
… classroom modules Testimonials: … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of … public datasets.  … The Integrated Microbial Genomes & Microbiomes system ( IMG/M ) supports the annotation, …
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Fungal & Algal Program
The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, from an international …
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Natural Prodcast Episode 17: Cassandra Quave
The guest we have this week is Professor Cassandra Quave from Emory University, with joint appointments in the School … find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … in bacteria as well. Yeah. DAN UDWARY: Yeah. Yeah, common root.  ALISON TAKEMURA: And so is that how your ethnobotany …
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FICUS-NERSC/KBASE
The ranked proposal list, along with a recommendation from management at JGI and the other participating … to DOE for final approval.  Following DOE approval, project managers negotiate project specifics with PIs … projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, …
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Frequently Asked Questions: Proposal Submission
… ; click on the call link to see specific details including project types supported, sample/capacity limits, and … are open to both domestic and international applicants from any institution type and at any career stage. … and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP …
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Single Cell Research Group
… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … A., Hadjithomas M., Varghese N. J., Paez-Espino D., Hungate project, collaborators Perry R., Henderson G., Creevey C. … N. N., Kelly W. J. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat …
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Natural Prodcast Episode 12: Nadine Ziemert
Prodcast. And it’s our conversation with Nadine Ziemert from the University of Tübingen in Germany. Like me, she’s a … miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports … in collaboration with other people, lake sediments. We have microbiomes from different organisms, including the human …
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