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How To Use Our Systems
… and connect our data to the broader biological data ecosystem. Our community of data-downloading users spans … Each portal lists a contact, or you can reach out via the form on our website.   … Looking for BBTools? Find it here.  …
Learn more
Natural Prodcast Episode 3: The Primer, Part 3
… is the first episode you’re checking out, you probably want to go back and listen to the first two parts ( part 1 is … it’s a little hard to find in print, but we live in the information age and the ebook version is available at most … to go ahead and, and synthesize those genes within a model organism like E.coli , and have it produce the …
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Institutional User Agreements
… Every approved proposal starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for synthesis. This agreement, required by the DOE for all … of the JGI User Agreement , JGI User Agreement for Federal Agencies , DNA Synthesis Appendix  and DNA …
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Sequencing Technologies & Products
… An assay used for profiling transcription factor binding sites across … samples in 96-well plates on automated liquid handler platforms, substantially increasing efficiency and scalability. Read more … The JGI uniquely offers quantitative Stable Isotope Probing (SIP) Metagenomics to the …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … are hard. But, I’m working on it because I really do want you all to hear this great conversation with Aaron Puri. … gas. And oftentimes people’s mind go right to anaerobic ecosystems. But these are actually– so methane– biologically …
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JGI Advisory Committees Code of Conduct
… our continuing contributions to advancing the research ecosystem. Their trust hinges on sustaining our record of excellence and respect, and for principles of integrity, safety and reliability. As … of the advisory committees serve as ambassadors and role models for the community, demonstrating the highest …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m … Dr. Betsy Parkinson is joining us today who is an assistant professor at Purdue University, and she has a joint … chemist. BETSY PARKINSON: Yes. JACKIE: And then do you want to tell us a little bit about-- you're trained in …
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Natural Prodcast Episode 15: Katherine Duncan
… And Kate is– I should ask, you are Kate Duncan? Or do you want to be Katherine Duncan or Dr. Duncan? Kate Duncan: Oh, … I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … and that are PhD students. And I think it’s a really nice model. I’d like to see more of this. It’s their ideas. So, …
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Fungal & Algal Program
… vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and … The program’s focus is on large-scale sequencing efforts that survey the vast phylogenetic and ecological … functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or …
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Single Cell Research Group
… material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic … of uncultivated lineages is of high value to establish models and hypotheses, experimental data is critical to …
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Publication Policy
… research project are appropriately recognized and credited for their work, while also adhering to the authorship … expect authorship to include all those contributing significantly to the work. The intent of this policy and the lists … to the work, and to identify those who contributed significantly.    Authorship Guidelines JGI will provide all users …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast episode 17. The guest we have this week … curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and now … with plants and how that affects overall forest health and ecosystem health. How cool would it be if you can use those …
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