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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data discoverability … Download plant, algal, fungal and microbial genomes and metagenomes — …
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s … It was just – it was sort of our place to be. And growing up with all those organisms around us, being now an … member, I realized that this field of biosynthesis was growing, and becoming pretty exciting. But everyone was …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with … focusing on how environmental stress and microbial communities affect plant growth and productivity. These …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at … industry. He holds joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at … the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm portal. Dr. Grigoriev engaged …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … In this episode, Dan and Alison discuss the basics of genome mining, as we get ready to talk to some of the experts in …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… The Joint Genome Institute and the Molecular Foundry have launched a joint Critical Minerals and Materials proposal call . This represents a … The JGI supports remote users. Users conduct experiments in their own labs or collect field samples. Depending on the …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … kinds,” noted Igor Grigoriev, head of the JGI’s Fungal & Algal Program, including work with Olivier Vallon of the … of the University of Ottawa on the multi-omics of arctic-growing Chlamy. Merchant continues to work on the tiny alga …
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PhycoCosm, a comparative algal genomics resource
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Viral dynamics in a high-rate algal pond reveals a burst of Phycodnaviridae diversity correlated with episodic algal mortality
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s … just been looking at like 16S taxonomic profiles of these communities looking at who is in there, but never like what … really high quality metagenome of the endosphere microbial communities for all the bacteria that are living inside the …
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