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The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities
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Axel Visel
… and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max … University of California, Merced. Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about …
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DAS Tool for Genome Reconstruction from Metagenomes
… genome recovery from metagenomes. The Science Through the JGI’s Emerging Technologies Opportunity Program (ETOP) , … both manual and automated binning methods also extends to harnessing future binning tools. DAS Tool is an example of … of community members and their genome-encoded metabolic capabilities and interactions. Supported by JGI’s ETOP, this …
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Near-Complete Genome Sequence of Zygosaccharomyces rouxii NRRL Y-64007, a Yeast Capable of Growing on Lignocellulosic Hydrolysates
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Genome Sequences for Six Rhodanobacter Strains, Isolated from Soils and the Terrestrial Subsurface, with Variable Denitrification Capabilities
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Large‐scale cultivation of the bumblebee gut microbiota reveals an underestimated bacterial species diversity capable of pathogen inhibition
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2022 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence … with access to the most advanced integrative genome science capabilities in support of the DOE’s research mission.     …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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Viruses Reprogram Cells into Different Virocells
… U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … project. For this project, RNA sequencing was done by the JGI, and proteomics and metabolomics analysis and microscopy at EMSL. The team … and operated under Contract Numbers DE-AC02–05CH11231 (JGI) and DE-AC05–76RL01830 (EMSL). This work was funded by a …
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Ben Bowen
… Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and … algorithm for metabolite identification in metabolomics. Analytical chemistry, 86(19), 9496–9503. … Bowen, B., & Northen, T. (2010). Dealing with the unknown: metabolomics and metabolite atlases. Journal of the American …
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Integrating Experimentation with Data
… $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory … The JGI and EMSL are U.S. Department of Energy (DOE) Office of … provide the scientific community access to cutting-edge capabilities for omics-based and analytical …
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