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Progress Reports: 2002–2020
Progress Reports from the Joint Genome Institute.  … FY20 Progress Report … FY19 Progress Report … FY18 Progress … Report … FY16 Progress Report … FY15 Progress Report … FY14 Progress Report … FY13 Progress Report … FY12 Progress Report … FY11 Progress Report … FY10 Progress …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … (CICESE) in her first microbial ecology paper in the journal PLoS One . “Puerto Nuevo is, historically, a fishing …
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iPHoP: A Matchmaker for Phages and their Hosts
… opens the possibility of using phages to engineer microbial communities. One day, these phages could boost … nutrient cycling, or carbon sequestration. Summary Existing programs use a variety of approaches to match a virus with a … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a link in … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … known fossil record of land plants and evolved in early microbial biocrust environments.     … The U.S. Department …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… to spring. These biodiversity hotspots harbor specialized microbial communities living in extreme conditions. The … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …
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JGI at the AGU Fall Meeting
December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … on Intensive Agricultural Lands Changes Nitrogen Cycling Microbial Communities and Reduces N2O Production Potential … poster B45O-1813  : Maggie Bowman, PNNL: “EMSL’s 1000 Soils Project: core collection strategy and data types available” …
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Computationally Classifying Fungal Lifestyles
… data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole genome data from newly sequenced genomes, …
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Cultivating Symbiotic Antarctic Microbes
… cycle. The JGI is sequencing large numbers of microbes and microbial communities that contribute to carbon cycling, and … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally demonstrated that … (DP150100244) and the Australian Antarctic Science program (project 4031). The work conducted by the US Department of …
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Building Sphagnum Genomic Resources
… (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … by routing the carbon away from methanogens. In The ISME Journal, a team led by researchers from the University of … In addition, this work reflects a collaboration between two programs within different Divisions of the Office of …
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Igor Grigoriev
National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He contributed to the Human Genome Project and led annotation and analysis of diverse … Editorial Board: BMC Fungal Biology and Biotechnology, Journal of Fungi, AIM Microbiology … Fungal & Algal Science …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate … P. hallii Mutant Library … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes … Functional exploration …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) and a chemical … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … (Nachwuchs-gruppe “Dr. Alexander Probst”), and the NOVAC project of the German Science Foundation (grant number DFG …
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