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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User Facility. She took special interest in it because she … many statistical tests for raw data and how to use some bioinformatics tools for analysis to help them focus on what to …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … Institute (JGI). EMSL and the JGI are DOE Office of Science User Facilities located at Pacific Northwest National … for User Science (FICUS) initiative . In this program, researchers leverage the capabilities of more than …
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Leo Baumgart
… technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods into … sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … of California, San Diego Postdoctoral training in bioinformatics, Lawrence Berkeley National Lab …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… (gene expression), and direct microscopy. Through the JGI’s Community Science Program , the team used metagenome assemblies, … locations to thoroughly characterize the archaeal lineage, information that they believe will lend insights into … Integrative Graduate Education and Research Traineeship Program, and Montana Agricultural Experiment Station …
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2022 Progress Report
… Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision The … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Lawrence Berkeley National Laboratory … The mission of the JGI is to provide the global research community with access to the most advanced integrative …
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Linking soil biology and chemistry in biological soil crust using isolate exometabolomics
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Dan Rokhsar
… joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational … Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the …
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Adaptation to Environmental Extremes Structures Functional Traits in Biological Soil Crust and Hypolithic Microbial Communities
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Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert
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10 From JGI on the 2019 Highly Cited Researchers List
… Manager Kerrie Barry, Cross-Field Category Fungal and Algal Program head Igor Grigoriev , Plant & Animal Science … categories Microbial Systems research group lead and User Programs Deputy Susannah Tringe, Cross-Field category … on Taxonomy of Viruses to outline the minimum amount of information for an uncultivated virus genome, including the …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the DOE Office of Science Graduate Student Research (SCGSR) program awards graduate students the opportunity to pursue … at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … caliber of scientists.” For her project, “Microbial Community Structure and Methane Production in California’s …
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