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Applying Viral Genomics Expertise to Understanding the Human Virome
… JGI researchers lend expertise to develop tools and data hub for … Berkeley National Laboratory, have collaborated with global researchers on projects related to understanding how … viral genomes. This includes (i) classifying viruses into groups that can be compared across studies, (ii) …
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A Model System for Perennial Grasses
… genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought … for developing methods for converting plant biomass into sustainable fuels for cars and jets. By studying a … that could be applied to switchgrass. Summary Rising global temperatures are causing extreme weather events, …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… part that was the most rewarding of all the work that went into this program was the feedback from the graduate student … Jorge Arroyo , director of UC Merced’s Undergraduate Research Opportunity Center, echoed similar sentiments for … and views” helped her further develop management and supporting skills for the students. Being able to do this …
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JGI Announces 2023 Community Science Program Awardees
… Tanja Woyke , JGI’s deputy of User Programs. “The proposed research by these PIs will address a broad diversity of … to the DOE’s Office of Biological and Environmental Research (BER) missions in: sustainable biofuel and bioproducts production, global carbon and nutrient cycling, and biogeochemistry. You …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… and planktos for ‘wanderer’). But they vary across the global ocean. Phytoplankton communities in warmer waters, … and gene expression. Sailing from pole to pole on four research cruises, they dipped their self-closing containers into sea water to sample algal communities along transects …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… that will help shape all of our futures.” Proposing a Research Experience Benskin wanted to give his high school juniors a research project experience and one of his email inquiries, … I hope they can walk away from this project empowered to go into college and seek out opportunities that they might have …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… systems to optimize microbial bioreactors. This genomic research creates new opportunities for biomanufacturing, … the JGI’s call for large-scale projects at their word, the research consortium aims to generate over a terabase of … will lead to large-scale AI-ready data to support the global research community. See below for the full list of …
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Defining a Pan-Genome for Antarctic Archaea
… Haloarchaea flourish in hypersaline environments, and researchers are interested in learning how these microbes … salinities 10 times that of seawater. To shed light on the global biogeography in the haloarchaeal gene pool, a team … conditions, understanding their adaptations offers insights into microbial evolution, as well as how Antarctic microbial …
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Taking Stock of the Known and Unknown Microbial Space
… an abundance of microbial genomes becoming available to the global research community.  Published January 17, 2025 in Science … and cultivate what is still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see … of DOE Office of Science Biological and Environmental Research (BER) missions. The JGI provides integrated …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … that some of these genes have moved from the mitochondria into the nuclear genome over evolutionary time. They also … mitochondrial genome into the nuclear genome over time — supporting the notion that the boundary between these two …
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Tracking the Origins of Methane-Producing Microbes
… tons of methane a year, which is over half the total global methane production. They are thought to use billions … in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg … mini-metagenomics to these samples by sorting the microbes into small pools of cells that were then sequenced …
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Expanding Virophage Diversity
… in capsid maturation. Recently reported in  Microbiome , researchers from the US Department of Energy (DOE) Joint … human (for the first time) gut and taxonomically classified into 27 distinct clades (17 of them without previously known … to 12-39. “Overall,” the team concluded, “we provide a global analysis of the diversity, distribution, and …
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