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Next generation sequencing data of a defined microbial mock community
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … neither the United States Government nor the University of California nor any of their employees, makes any …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … to keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by Hal …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… A two-day kick-off meeting held at Lawrence Berkeley National Laboratory … a diverse range of topics related to structural biology, single cell and systems biology, omics, and big data … science, energy conversion and water treatment as well as microbial ecology with a focus on metabolism and ecosystem …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling … In order to do so, these organisms share space at cellular scale: fungi stretch a network of tendrils called … with Cole and Serrano to collect and analyze the single nuclei and spatial transcriptomics data this work …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … in the biofuel and synthetic biology fields. In a living cell, triplets of nucleotides, or codons, dictate which …
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Genomic Characterization of Candidate Division LCP-89 Reveals an Atypical Cell Wall Structure, Microcompartment Production, and Dual Respiratory and Fermentative Capacities.
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Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
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Leo Baumgart
… his doctoral research in synthetic biology and microfluidics at the University of California, San Diego. As the … bacteria, fungi, and plants. His team is also developing single-nuclei sequencing methods to characterize gene regulation at the level of individual cells across diverse plant tissues. Dr. Baumgart focuses on …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in … chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under …
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Boosting Small Molecule Production in Super “Soup”
… Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … to keep processes running smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal …
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