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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … “Now with these new tools — metatranscriptomics, RNA sequencing of soil RNA — we can access — ‘What are they … some fungal species, other fungi will fill in needed functionalities. This work also shows new overlap between …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to their User Executive … serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons … terms. The JGI solicited UEC nominations in late 2022 and the election period concluded on Jan. 6, 2023. With …
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2025 NeLLi Symposium
…   Registration has closed   Registration fees: Regular attendees  …   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … centered on how to capture, define, quantify, and functionally characterize microbial diversity. The Symposium …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … and can serve no more than two consecutive terms. In late 2021, the JGI launched a solicitation for nominations for …
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes … at the HudsonAlpha Institute for Biotechnology Genome Sequencing Center and a member of the JGI Plant Program. … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … With roughly half of all fungal genes still lacking functional annotations, the challenge to applying AI is …
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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UC Merced Interns Reflect on Their JGI Summer Projects
… Over the course of eight weeks this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the … Intern: Sidharth Babu (undergraduate) Mentor: Zhong Wang Click the image … Intern: Brendan Blasius (undergraduate) Mentor: Guohong …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the … industry, and government organizations for three days of scientific presentation, interactive panel discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. …
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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing
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Whole genome assembly from 454 sequencing output via modified DNA graph concept
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Genome Calligrapher: A Web Tool for Refactoring Bacterial Genome Sequences for de Novo DNA Synthesis
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