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… joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and … the biological mechanisms that enable fungi and algae to play a vital role in carbon cycling, biodegradation and …

… in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry … as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw …

… Journal publication caps JGI pilot project with fledgling Florida high school … evokes images of fanboats skimming over swamps, while alligators peer through the waters and clouds of insects hover … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …

… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model … polymorpha. Commonly known as liverwort, this was done to gain insights into gene families involved in adaptations …

… prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with little or no … by the United States Department of Agriculture National Institute of Food and Agriculture grant … the United States Department of Agriculture National Institute of Food and Agriculture grant 1019985, and …

… opportunities in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … 4th year PhD student in Quantitative and Systems Biology Mentor: Guohong Wu, Plant Comparative Analysis What effect has …

… over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look at more ecosystems and organisms than … — that’s three-quadrillion base pairs of DNA sequence! To meet this “ data tsunami ,” as Kathy Yelick of the …

… the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial … private sector, as well as research expertise in secondary metabolites and synthetic biology. Dr. Mouncey has a … Industrial Microbiology and Biotechnology in 2022-2023.   Commentary …

… The Secondary Metabolism Collaboratory encourages user engagement. … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … Dan Udwary talks about the Secondary Metabolism Collaboratory  …

… reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … site. The chemical PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via … Superfund site. The Impact The Comprehensive Environmental Response, Compensation, and Liability Act (CERCLA) was …