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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … expressing, the team sequenced their RNA transcripts. All sequencing was done through the JGI Community Science … is going to be used to advise policymakers to mitigate the effects of climate change on ecosystems, because we now have …
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JGI Workshops at PAG
… The purpose of this Workshop is to illustrate the expansion of this field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER … Science In this workshop, we will present current and ongoing developments at the JGI and KBase toward integrative …
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gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence extraction for prokaryotes and eukaryotes
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A Complex Confection Decoded: Sugarcane Reference Genome
… work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … sugarcane was published as a step forward in this effort. Sequencing and assembling the genome required a custom … of the diversity present in R570 but shows the genomic effects of breeding practices that transformed sugarcane …
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Plant Program
… challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing humanity. A major focus are …
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Alabama A&M Interns Access An Abundance of Knowledge
… DOE RENEW initiative, undergraduate student Ti’Yanna Watson and graduate student LaMonika Dent worked with JGI mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts … and the University of Bordeaux have developed a platform that mimics chloroplast function within a … Genome Institute, a DOE Office of Science User Facility (contract no. DE-AC02-05CH11231) with T.J.E. as grantee. …
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High-Quality Draft Genome Sequence of the Opitutaceae Bacterium Strain TAV1, a Symbiont of the Wood-Feeding Termite Reticulitermes flavipes
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Supporting Global Research into Actinomycetes
… word. The 500 species described within the group are responsible for roughly two-thirds of antibiotics, and a deeper … and therefore a cornerstone of ActinoBase,  a public platform built on the knowledge of researchers studying … Otani, an author on the paper and contributor to the platform. Otani is also a scientist at the U.S. Department …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a … to stress and host specificity, particularly regarding the effects of climate change. Summary A team led by researchers …
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Partners
… science and serve as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to …
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Dan Rokhsar
… JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational efforts directed towards the sequencing, annotation, and analysis of three human … AB in Physics, Princeton University, NJ MS in Theoretical Physics, Cornell … Cornell University, NY Postdoctoral scientist, IBM Watson Research Center, Yorktown Heights, NY …
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