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… technology in order to enhance the quality of single-cell genomes and directly link functional information with … DNA amplification, and sequence analysis to recover the genomes of uncultivated microbes. We also apply labeling … To provide additional functional insights into microbial genomes, the JGI now uses laser microdissection to …

… to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … The transcriptomes edit out these distractions. Combining genome and transcriptome information allowed the team to … them. Based on data reported in the April issue of Soil Biology and Biochemistry , the team found that fungi are …

… more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … over 1.3 million publicly available bacterial and archaeal genome and contig sources.  The Impact Secondary metabolites … or tools. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …

… review process or get details on the internal synthetic biology review process .  … Proposers are encouraged to …

… gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative … Plant Pan-Genomics Comes of Age . Annual Review of Plant Biology 72, 411. Gordon et al., 2020.  Gradual polyploid … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

…   Join the Joint Genome Institute (JGI) and the Environmental Molecular … include:  environmental microbiomes biodesign and synthetic biology AI/ML-enabled laboratory automation, data …

Cross-Field category Research Scientist Natalia Ivanova, Biology & Biochemistry category Prokaryote Super Program … a long-term project to sequence, annotate and analyze the genomes of more than 300 Aspergillus Go here to learn more … the minimum amount of information for an uncultivated virus genome, including the source, methods of identification of …

… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … accounts for 80% of global sugar production. A reference genome for the sugarcane cultivar R570 has been  published … a crop. The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information …

… review process or get details on the internal synthetic biology review process .  … Proposers are encouraged to …

… results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for … most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists usually employ … extracting single cells and then amplifying their DNA for genome sequencing was no easy task. The traditional way of …

… energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … a symbiotic relationship with the poplar, a JGI Flagship Genome and the first tree to have its genome sequenced. Having this first genome sequence of a …

… intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the coadvisement of … JGI internship led to her co-authorship on a 2017 Plos Biology “The JGI-UC Merced Genomics Distinguished Graduate …