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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can … … Cataloging the Microbiome of U.S. Rivers … GROWdb pilot project … GROWdb public narrative … From our partners … From …
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Game On: High School Students Drive Everglades Metagenomics Study
… a member of JGI’s Sample Management Group, attended a conference in Florida to discuss a JGI pilot project involving soil sampling in the Florida Everglades to … data set on the IMG portal. The class discovered Actinobacteria, Acidobacteria, and Proteobacteria to be the most …
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Understanding Wildfire Recovery, Starting in Soil
… at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … DOE Office of Science National User Facilities in a single project. … This work was supported through a USDA NIFA award …
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … the fungal Tree of Life, including the 1000 Fungal Genomes Project, which aims to provide a reference genome for each …
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… polar oceans give rise to some of the largest food webs on Earth. And at their base are microscopic, photosynthetic … important cold-water communities of algae with warm-adapted ones, a trend that threatens to destabilize the delicate … microscopic photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for …
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David Goodstein
With a background in experimental and computational surface physics, Dr. Goodstein held positions at … in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic … NY … RJ Craig et al., 2023.The Chlamydomonas Genome Project, version 6: Reference assemblies for mating-type …
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Sphingomonas palmae sp. nov. and Sphingomonas gellani sp. nov., endophytically associated phyllosphere bacteria isolated from economically important crop plants
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome … together to develop recommendations for cultivating new Bacteria and Archaea revealed by a recent genome census . … Lead Tanja Woyke , Microbial Program Gitta Szabo , User Project Coordination Rekha Seshadri, Functional Annotation …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal submission process. You can review … ; click on the call link to see specific details including project types supported, sample/capacity limits, and … should indicate this in the proposal so we can select the project provisionally. If your project makes it successfully …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science … (Spruce and Peatland Responses Under Changing Environments) project, assessing how northern peatland ecosystems respond … such as sphagnum’s associations with methane oxidizing bacteria, nutrient uptake, and its productivity and …
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Forming Scientific Connections and Building Community
… and seven graduate students from UC Merced through their long standing internship program. In just two months, the … and also made new friends while working on their summer projects. Watch the short video here to see what they had to … “ Exploring the epigenetic basis of pathogenicity in bacteria” Erika Maquiling : “Being a JGI intern means going …
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