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… using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses … With this metagenomic analysis, it was possible to identify specific attributes — such as heat resistance, fast … Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User Facilities …

… of an integrated platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines … and enables efficient analysis and reporting of sequencing projects and their status. Mr. Shahab has extensive … developing solutions for large-scale sequencing projects and data analysis pipelines.  …

… applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo … single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …

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… could help us grow better crops, with less impact on our planet. …

… Handling Editor, Journal Experimental Botany, 2022 – present University of … to co-functionality: Eukaryotic gene neighborhoods as a resource for function discovery. Mol Biol Evol  38(2): 650-662. …

… JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab … space and facilities, finance and procurement, human resources, safety, and administrative activities. The Deputy of … infrastructure and business functions. He acts as a resource and provides advice and counsel regarding current DOE, …

… the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the … albeit rather weakly. Further investigation on the source of controversy revealed that the branches among … diversification of the early terrestrial fungal lineages. Our analyses estimate these diversification events occurred …

… mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese relative … Asia. Afterward, Lentinula groups evolved further, to four major groups: a lineage in Australasia and L … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome …

… and thousands of resequenced sorghum varieties, a resource for breeders and researchers to harness the traits … and sequences together at once, producing a pangenome resource for sorghum , recently reported in Nature . “We wanted … of Energy, the Gates Foundation, the Advanced Research Projects Agency-Energy (ARPA-E) and the United States Agency …