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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of … lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  Nucleic Acids Research . The … genotypes by Dr. John Mullet; Dr. Tom Juenger and his postdoc Xiaoyu Weng from Univ. of Austin, who previously led …
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Alabama Agricultural & Mechanical University Internship Program
… success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific …
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User Support Analysis Group
… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … abundant bacterial group in the ocean. Later during his postdoctoral work at the Massachusetts Institute of … to culture these microbes in the lab. After joining the JGI, he formed the Microscale Applications group to operate …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 … the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass spectrometry-based … 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced mass …
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Ben Bowen
T., Rübel, O., Keasling, J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially …
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge … and epigenomics. Expansion of sequence space:  The JGI generates reference genomes from diverse bacterial and …
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Yasuo Yoshikuni
… has supported over 250 projects since it started. At the JGI, Dr. Yoshikuni also manages the Synthetic Biology … for building composite materials. Before joining the JGI, Dr. Yoshikuni was co-founder and chief science officer … Ph.D. in Bioengineering, University of California, Berkeley Postdoctoral training in Biochemistry, University of …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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