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JGI announces 2023 CSP Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Natural Prodcast Episode 5: Brad Moore
Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … the mid-late ’80s. And at that time, you know, it’s before genomics existed. This is before we’re even thinking of … stages of connecting molecules and genes. And then genomics happened. Dan: Yeah, I did my first genome sequence …
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JGI@25: Solving the Mystery of the Missing Oil
Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in … also helped track and characterize the shifting waves of microbial communities involved in removing different … at exactly what happens at all levels and developing models for cellular properties, communities and ecosystems.” …
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Jeremy Schmutz
… working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed … & Schmutz, J et al. 2012. Reference genome sequence of the model plant Setaria. Nature Biotechnology 30: 555-561. The … Initiative. Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 2010;463:763-8. …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly known as … plant lineages makes it ideal for comparative genomics studies, offering insight into genes critical for …
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Tomas Tyml
Tomas uses traditional cultivation methods along with microscopy and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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High-resolution phylogenetic microbial community profiling
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JGI announces final round of 2022 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … into biological function. Through our CSP Functional Genomics call , we look for projects that will leverage the …
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Exploring Polymorphisms Created by Transposable Elements
… measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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