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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … cell- and cell-free expression platforms.  … We closed our 2018 Strategic Plan at the end of September, 2023 with over …
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Help from Citrus’ Bitter, Hardier Cousin
The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of Food and Agricultural Sciences (IFAS). Deng and colleague Fred Gmitter, a UF/IFAS professor of citrus breeding …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities … exist back then,” said Hal Alper, a University of Texas at Austin professor, “but we really first heard about the …
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Natural Prodcast Episode 9: Roger Linington
… … DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … let me know! I’m dying to hear from you. Toss an email to  jgi[email protected] , or leave us a review on Apple Podcasts … structures is obviously very valuable. From my perspective, JGI has a large database of biosynthetic gene clusters and …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
For many scientists, the culmination of their work into a written report that is published … Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel provided a broader …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change … ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 water samples. Genomic DNA … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Metagenome Program
… technologies to decode the genomes of microbes in their natural environments. This work encompasses bacteria, … viral populations. Enabling microbiome data science:  The JGI supports microbiome data science by enabling comparative … analysis through the IMG/M platform. Further, the JGI partners with the National Microbiome Data Collaborative …
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Plant-Microbial Interactions Group
Plants are complex organisms that harbor a fantastic diversity of cell types and associated … truncatula and an arbuscular mycorrhizae, Rhizophagus irregularis using single-cell and spatial ‘omics … 10.1371/journal.pbio.2002860 … Postdocs: Margot Bezrutczyk (JGI Postdoc) Lamprinos Frantzeskakis (JGI Postdoc) Interns: …
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