Search

Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He received his Ph.D. from the Wellcome Trust Sanger … understand genome function in bacteria. Since 2016, he has been the lead of the User Support Analysis group. The group …

… techniques and computational tools, the program supports foundational research related to soil nutrient … but highly recommend using the workflow in  GNPS2 .   … In support of user science, the JGI Metabolomics Platform …

Research (BER) program to enable scientific discovery in support of the DOE mission. Fermentative metabolism occurs in environments such as ruminant guts, sediments, and anaerobic bioreactors. Aside from … the predicted and actual end products. … This work was supported by the United States Department of Agriculture …

Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes we've sequenced, … The study, added co-first author Rekha Seshadri, is a wake-up call to revive the art of hands-on microbiology and … bioeconomy. “While computationally derived MAGs have been a revolutionary tool for microbiology, it's a call to …

… is a widespread, perennial grass in North America that has been the target of extensive natural sampling and field … et al. focused on the 4X variety, largely because it’s been prioritized in breeding efforts, and also because 8X … idea that 8X switchgrass was an unremarkable, homogenous group and raised several important questions. Where did the 8X …

… associate director of its Thermal Biology Institute. He’s been investigating methanogenesis and methane-makers as a … down potential sources of methanogenesis, with metagenomic support from the JGI. First they were able to identify the … counterparts.  “All the microorganisms that we have been studying for a long time have really complicated …

… in both genome content and structure following a genome duplication event that occured some 60 million years ago. … cousin. Ceratopteris richardii, or C-fern, specifically has been studied in plant research laboratories and plant … a long time, this immense size and chromosomal hoarding had been thought to be the result of multiple whole-genome …

It’s that third component, lignin, that has historically been less of a resource to be extracted and more of an … accurate, and maybe anaerobic fungi living in soils or the guts of livestock were more capable than presumed. After … a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of …

… scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out from previous … Adding Value Beyond Genome Sequences Much of the data had been generated from environmental samples  sequenced by the … associating 81,000 viruses – 70% of which had not already been associated with a host – with 23,000 MAGs. Modeling A …

… over a billion years old. It’s an insanely diverse group of organisms that include some delicious additions to a … at making proteins likely factors into why fungi have been so evolutionary and ecologically successful,” Wint … portals used by the JGI to process data. These areas had been previously identified as gaps in the curriculum through …

… called Brachypodium distachyon. LaMonika Dent : We have been working on creating transgenic plants with CRISPR Cas9 … here is the community aspect. Everyone here has also been so very nice and willing to lend a helping hand at any … just watching and observing your mentor, but also being a support for them and contributing to what they’re trying to …