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… researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … United States. They also provided multiple access points to the information. The team harnessed a community-science … from the National Microbiome Data Collaborative. The published river microbiome datasets are also available …

… how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … and industry applications. Summary In their recently published Nature Communications article , the team used … and viral genomes, as well as genomes sampled all at once from the same environment, called metagenomes. Why? Simon …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … tools, allows  Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … was  recently published in  Nature Communications by an international, multi-institutional team. The work was a …

… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse … with main focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of highly customized analysis workflows …

… the User Support Analysis group. He received his Ph.D. from the Wellcome Trust Sanger Institute and Cambridge … editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, where he worked on computational and … genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on projects to …

With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of … the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … genomic tools, allows Miscanthus to both inform and benefit from breeding programs of related candidate bioenergy … was recently published in Nature Communications by an international, multi-institutional team. The work was a …

Analysis reveals cotton genome stability across global lineages . Come harvest … of these five cotton lineages. Senior authors of the  paper published April 20, 2020 in  Nature Genetics include Jane … the textile industry, and consumers will derive benefit from this high impact science for years to come,” said Don …

Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

To provide broad plant genomic capabilities, the DOE Joint … – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … team contributed additional sample sets, such as sorghum internode time course data from 4 different genotypes by Dr. …

… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … Clum, A. et al. (2021)  DOE JGI metagenome workflow …