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JGI at the AGU Fall Meeting
This year the AGU Fall Meeting, with the theme “Science is … Tips for Submitting Successful Proposals December 9  4:15pm PT (online) Town Hall on how the Facilities … in Sacramento-San Joaquin Delta, California” December 14 8:05am Convention Center, Rm 231-232: Josue …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… data obtained from environmental samples — to identify over 27,000 microbial genes. These genes were identified …
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Training the Next Generation of Talent
… of California, Merced to start orientation as a first-year graduate student in the Quantitative Systems Biology … which is best for the task at hand. “There are at least 30-40 programs and it is not clear which are the best to use,” … I’ll take that knowledge back with me.” Now a second-year evolutionary biology student in David Ardell’s lab, he …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… a JGI Community Science Program proposal that started six years earlier, researchers put together what they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources … a variety of methane-mitigation goals. One aim is identifying chemical compounds that could inhibit microbial …
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Marine Microbe Contains Multitudes
… with different lifestyles. The Science The bacterium SAR324 is unusually cosmopolitan. In the ocean’s North Pacific … cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii Ocean Time-series (HOT), they collected … namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial species. All SAR324 have very closely related …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… diatoms and kelp. Dubbed Phytopthora ramorum (pronounced: Fy-TOFF-thor-uh ra-MOR-um) the genus in Latin translates to … disease and how to control them. Despite advances in the years since this landmark publication, SOD continued to … spread of a plant disease, according to Garbelotto. In one year alone, 500 people participated in SOD Blitz activity, …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… to analyze samples from one experiment. Starting a  few years ago, researchers can request quantitative SIP analysis … and Reusability) for data reuse.  In the last year, JGI’s user community has helped propel multiple … for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted to get into the nitty gritty with the people …
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Access to Rock Star Scientists
… done the groundbreaking work you’ve been reading about for years! And you can ask them about it! And they’re super …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … to easily analyze viral genomes. This includes (i) classifying viruses into groups that can be compared across … The work is supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 … Lawrence , the first graduate student intern from the 2014 cohort. After working on his post-doctoral position with …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation could look like. In one article, … ecological and environmental processes, especially by modifying host cell metabolism and altering cell fitness. As the …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Genomics call for proposals . The proposal call is open year-round, but proposals submitted by July 30 will be … and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of California, …
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