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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… version of a specific chemical, where ordinary Carbon-12 atoms are swapped for the heavier, non-radioactive isotope … to analyze samples from one experiment. Starting a  few years ago, researchers can request quantitative SIP analysis … and Reusability) for data reuse.  In the last year, JGI’s user community has helped propel multiple …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE … metagenome-assembled viral genomes ( Nature Biotechnology , 2021), geNomad , a tool for identifying mobile genetic …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the … of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, … it leads to reduced harvest yields. Over thousands of years, farmers have selected for cereal plants without this …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship … University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation could look like. In one article, … studying virus-host dynamics in nature. In the last few years, mapping the planet’s viral diversity has advanced …
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A Plant Root Atlas for Tracking Developmental Trajectories
… research by then-Biosciences scientist Diane Dickel in 2017. In 2019, plant single-cell methods were officially called out … Five Berkeley Lab Scientists Receive Prestigious Five-Year Research Grant   … The U.S. Department of Energy Joint …
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
Genomics call for proposals . The proposal call is open year-round, but proposals submitted by July 30 will be … [DNA Synthesis Science Head] Yasuo [Yoshikuni] gave back in 2016.” Alper’s first approved JGI proposal came through the … development and its applications. “I moved to UC Davis in 2014,” recalled Philipp Zerbe of the University of …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few … solve energy and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of …
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Waiting to Respire
… ancestral bacteria’s energy sources. More than two billion years ago, cyanobacteria acquired the ability to produce … to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… type of food that was in the contaminated aquifer in 2007 to achieve this goal. In less than four years, parts of the shallow portions of the groundwater were … remain.  To identify the microbes involved in the early years of the biodegradation process, researchers collected …
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JGI@25: Building a Better Bean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … iron content and have a longer shelf-life — up to four years. Work is now underway to transfer the trait into other …
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