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Learning to Look
July 22, 2019, in  Nature Microbiology , a team led by scientists at the U.S. Department of Energy (DOE) Joint … phyla across virtually every ecosystem.” By significantly expanding the known diversity of these viruses, genomic … and also those associated with humans.” The work also used resources of the  National Energy Research Scientific …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition … The team found that some of the adaptation strategies used by liverwort are also seen in flowering plants, or … understand their evolutionary history.  … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) …
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Common Ancestry and Novel Genetic Traits of Francisella novicida-Like Isolates from North America and Australia as Revealed by Comparative Genomic Analyses
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The INSIG2 rs7566605 genetic variant does not play a major role in obesity in a sample of 24,722 individuals from four cohorts
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JGI Workshop at SIMB NP Meeting
… discovered and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often … hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome …
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Products
… variants with sample sequencing to predict the number of successful variants made depends on project DNA Synthesis … ), mapping 273/273 Metagenome Cell Enrichments Obtained by physical separation of a biologically relevant unit from … on genome characteristics, availability of external resources and project goals. Selected genomes will be …
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From Competition to Cooperation
… lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were … particularly how fungi that feed on decaying plant matter (saprotrophs) have transitioned to the symbiotic lifestyle. … genomes of symbiotic species available: 73 saprotrophs and 62 mycorrhizal species. The 62 mycorrhizal species include 29 …
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2024 Progress Report
… the community through responsibly managing our people and resources.     Director's Perspective Over the last year, … with a record output of products, making data easier to access and use, and by investing in the latest advanced genomic capabilities to …
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Igor Grigoriev
Russia PhD in Molecular Biology, Research Institute for Genetics and Selection of Industrial Organisms, Moscow, … CA … Lankiewicz et al (2023) Lignin deconstruction by anaerobic fungi.  Nature Microbiol. 8(4):596-610. Nelson … 762-765. Gobler CJ et al. Niche of harmful alga  Aureococcus anophagefferens revealed through ecogenomics.  Proc …
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Help from Citrus’ Bitter, Hardier Cousin
… traits responsible for  P. trifoliata ’s hardiness, according to Zhanao Deng, an environmental horticulture … Fred Gmitter, a UF/IFAS professor of citrus breeding genetics and longtime JGI collaborator, are senior authors … secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, published over the last …
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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