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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … In part because of this evolutionary diversity, algal genomes can be incredibly complex and difficult to sequence …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their … very first project — the revolutionary work of the human genome project, which spanned nearly two decades, was filled … was to put together a ‘Best of the Best’ genome sequence list, which I found utterly frustrating and impossible to …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was … Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus … eight JGI researchers on the 2023 Highly Cited Researchers list, and has appeared on the list since 2020. …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Harkess of Auburn University started as a small-scale white paper focused on duckweed through the  CSP New Investigator … The approved proposals started October 1, 2020 and the full list is  available here . They are expected to generate …
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JGI@25: Studying Sorghum’s Survival Skills
… climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … In 2009, the JGI sequenced and analyzed the first reference genome for Sorghum bicolor . Since then, 2,993 publications, … sorghum plants in drought conditions for three years (2016-2018) in the field in Parlier, California at the UC …
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … complex polyploid genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, …
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Zhong Wang
… scientific projects. These solutions include large-scale genome variants analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on … Shandong University, Ji’nan, China … A complete list is available on Google Scholar . … ALE , assembly …
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Workforce Development & Education Outreach
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Genome Sequence and Analysis of the Flavinogenic Yeast Candida membranifaciens IST 626
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CSP New Investigator Call
… for this call may be submitted at any time as brief white papers. Applicants may submit up to two proposals per year (but may be listed as co-PI on an unlimited number of proposals).  For …
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Editorial: Cell Free Biocatalysis for the Production of Bioproducts
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JGI@25: The Little Alga That Could
… of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published in the journal Science . … in Merchant’s lab who is first author on an upcoming paper, discovered that in the original strain, a protein …
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