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Ben Bowen
… impactful scientific discoveries, supporting the DOE’s Biological and Environmental Research user community in their bioenergy and environmental objectives. … BS – … U., Cadillo-Quiroz, H., Garcia-Pichel, F., & others (2015). Exometabolite niche partitioning among sympatric soil …
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Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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2024 Progress Report
Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … and analysis workflows that we offer. We welcomed interns and visiting scientists from around the world — and …
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Expanding Virophage Diversity
… with giant viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid … Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome … and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. Kyrpides led the development …
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Fungal Friends or Foes in Plant Roots
… roots with genomes from other plant-associated fungi. Their analysis identified fungal gene families that help … and Environment (INRAE) and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… both a gene likely important for sex determination and a shared genetic architecture with Y chromosomes in mammals: a … feedstocks of interest to the U.S. Department of Energy (DOE). (Poplar is a Flagship Plant.) To engineer them, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Cataloging the Microbes that Manage the Health of River Systems
… systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … river microbiome datasets are also available through the DOE Systems Biology Knowledgebase, allowing researchers to … Program and the University of Colorado Anschutz’s Genomics Shared Resource. The work (proposal …
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Synthesis
… assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program.    Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … nominees. The selection process for AAM Fellows is based on their records of scientific achievement and original … Symposium which is being held in conjunction with the DOE Joint Genome Institute’s 15th Annual Genomics of Energy …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in the soil samples of these varied biomes; the forests share only about 20% of their fungal species. To make useful …
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