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Nitrite Oxidizer Activity and Community Are More Responsive Than Their Abundance to Ammonium-Based Fertilizer in an Agricultural Soil
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
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AraR plays a more dominant role than XlnR in plant biomass conversion in Penicillium subrubescens
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New and Improved: Eucalyptus Reference is Now Accessible
… meaning the genome is reconstructed in much larger and more complete segments. This allows for more accurate and … The new improved genome assembly generated through the JGI’s Community Science Program will help support targeted … to the efforts of the  U.S. Department of Energy (DOE) Office of Science Biological and Environmental Research …
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Work With the JGI! Tips for a Winning CSP Proposal
… The JGI’s Community Science Program gives researchers access to … tips from Tanja Woyke, who runs user programs at the JGI, and project manager Miranda Harmon-Smith, who helps …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be … and environmental challenges. Over the past 25 years, the JGI has hosted interns from a number of universities and …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus … Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … US Department of Energy JGI (https://ror.org/04xm1d337), a DOE Office of Science User Facility, was supported by the …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and … enabling scientists to see what molecules they produce. For more on this feat, see this Lawrence Berkeley National …
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Seven genome sequences of airborne, bacterial isolates from Antarctica.
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The Expanding Universe of Methane Metabolisms in Archaea
… an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions of years ago, … database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … of microbial, fungal, and plant research projects.  More recently, these long-reads have been applied to DNA … as input. Data analysis Q:  What types of analysis support does JGI provide for DNA modification detection? A:  DNA …
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The JGI announces 2024 awardees for our Community Science Program annual call
… Hannah Schulman, Bram Stone and Jana Voriskovaa The JGI is excited to announce the fifteen scientists selected … various important scientific questions relevant to the DOE’s mission, and I look forward to seeing their outcomes.” … and nutrient cycling, and biogeochemistry. You can learn more about this call, as well as smaller-scale calls …
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