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… classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …

… also interested in developing or improving bioinformatics tools that can help with dataset analysis, as well as how they can be shared with and … easy to break down, as well as developing synthetic biology tools that can help produce value-added products from these …

… and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …

… of enzymes. It’s useful to differentiate these enzyme tools into two groups: core metabolism and specialized … screwdrivers in a toolkit. This way, these important tools are always around, regardless of malfunction or …

… a similar type of search in microbial and metagenomic databases. In this case, the machine “learned” to identify a … and his colleagues developed first worked on a reference dataset that included genome sequences known to be … of phage-bacterial coevolution and are also useful tools in CRISPR-Cas applications, but we are limited in our …

Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most … illustrates how the research community brings together the data resources enabled by the DOE Biological and …

… . … Morel Mushrooms on MycoCosm Data Portal …

… through over 55 billion genes and 16 trillion DNA bases of data, to figure out what to study and compare for the … to come up with a sense of what to focus on. With so much data and a lack of experience, this added a layer of … tests for raw data and how to use some bioinformatics tools for analysis to help them focus on what to pull out …

Metagenomic datasets could help map out microbial diversity hotspots … biodiversity. Using publicly available genome sequence data generated over the past three decades, their study … the Functional Annotation team within the JGI’s Microbiome Data Science group. “Turns out that despite all the genomes …

… with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides access to the wealth of public microbiome sequence data and enables the user to analyze these data with …

… and combining the information with previously published datasets. The work was  recently published in the journal  … “This represents the largest integration of single-cell datasets in plants and provides a foundation for still … Strategic Plan. The present paper provides a foundational data set that is now available through a new  single-cell …