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… (NEON) in collaboration with the National Microbiome Data Collaborative (NMDC) to produce open metagenomics data. Taking the JGI’s call for large-scale projects at … The accepted proposals will lead to large-scale AI-ready data to support the global research community. See below for …

… samples in a single experiment — and integrated these data with single-cell gene expression maps. Together, the scale of data enabled by these approaches creates a vast resource … stricter filtering criteria provides a robust community dataset of improved quality; deep insights identify the most …

… the User Support Analysis team to analyze plant microbiome data via programming languages like Python. The more … plants and extracting DNA. They also analyzed 16s amplicon data to determine microbiome composition. This gave them an … launch a jupyter notebook running R so they could do their data analyses.  When they weren’t in the lab, they were …

… invaluable scientific and technical experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at … hi everyone. My name is Deanna Beatty, and I'm a genomic data scientist here at the JGI, and really happy to be here … Jacobs. I'm a rising sophomore at UC Berkeley studying data science. I’m here at the Lab with the SEED scholars at …

… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for …

… Harnessing BER-funded data resources, researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most … illustrates how the research community brings together the data resources enabled by the DOE Biological and … Datasets …

… to link experimental evidence across species. Centralized databases with large-scale transcriptome projects such as … is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio … seven more groups joined the project to contribute to the data for six new species. I must mention that some of the …

… interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint …

… and research scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out … Adding Value Beyond Genome Sequences Much of the data had been generated from environmental samples  … Eloe-Fadrosh noted that it was a nice example of “big-data” mining to gain a deeper understanding of the data and …

… eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics (metagenomics, …