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JGI Portals
… engineers to leverage our data to develop new algorithms, models and tools in support of DOE mission priorities. Data …
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From Competition to Cooperation
… the framework of the Mycorrhizal Genomics Initiative (CSP # 305), Metatranscriptomics of Forest Soil Ecosystems project (CSP # 570) and the 1000 Fungal Genome projects (CSP # 662 & 1974). This research was also supported by the …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… is on cone snails, C. californicus in particular, as a model system for venom-microbe interactions. Cone snail …
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Simon Roux
… Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France … microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum Information about an Uncultivated Virus Genome … Researcher (Cross-field), 2020 LBNL Early Career LDRD, 2018 Senior Editor: Microbiology Resource Announcements …
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A molecular survey of Australian and North American termite genera indicates that vertical inheritance is the primary force shaping termite gut microbiomes
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Graduate Students Get Thesis Research Opportunity at the JGI
… of the latest SCGSR award is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship … microbiomes. Tringe was also Kaze’s mentor during her 2018 internship, in which she explored anthropogenic impacts …
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JGI@25: From Life at the Extremes to Editing Genomes
… has resulted in several papers, including one in 2018 on the discovery of miniature CRISPR-associated … Cell. 2019 Feb 21;73(4):727-737.e3. doi: 10.1016/j.molcel.2018.12.015. Harrington LB et al. Programmed DNA destruction by miniature CRISPR-Cas14 enzymes. Science. 2018 Nov 16;362(6416):839-842. doi: 10.1126/science.aav4294. …
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DOE JGI Interns Share Their Summer Experiences
… worked with Zhong Wang while Karen Tolentino worked with Brachypodium researcher John Vogel. Other students hosted …
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Fungal Friends or Foes in Plant Roots
… work was partly enabled by a JGI Community Science Program (CSP) proposal led by INRAE’s Francis Martin that contributed … Contract No. DE-AC02-05CH11231 within the framework of CSP 1974 “1KFG: Deep-sequencing of ecologically relevant …
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Three Join the JGI User Executive Committee
… on review panels for the JGI Community Science Program (CSP) proposals. He  brings experience representative of the … to her early career success, and is currently a PI for both CSP New Investigator and large-scale CSP projects. Wilbanks has served on review panels for the …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in synthetic biology …
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Mike Sneddon
… Biology Knowledgebase. Nature Biotechnology 36, 566–569 (2018). Sneddon, MW, Pontius, W, and Emonet, T. Stochastic … (2012).  Sneddon, MW, Faeder, JR, and Emonet, T. Efficient modeling, simulation and coarse-graining of biological …
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