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The Surprising Structure of a Shrub Willow Sex Chromosome
… can be befuddling. Most species are hermaphrodites, expressing both male and female gametes in one individual. But some, including shrub willow  Salix … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …
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A Powerful Technique to Study Microbes, Now Easier
Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots to help process experiments that …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell … that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome … and microbial symbiosis.  This is a continuation of the previous NeLLi Symposia. In this 2025 Symposium, we will … Lead Tanja Woyke , Microbial Program Gitta Szabo , User Project Coordination Rekha Seshadri, Functional Annotation …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
In honor of the JGI's 25th anniversary in 2022, we have … to how humans could do the same on an industrial scale to produce biofuels . Since one of the challenges of developing … coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
In honor of the JGI's 25th anniversary in 2022, we have … crop. In 2018, the JGI had sequenced and assembled the genomes of two varieties of a close relative and model … have also harnessed the switchgrass gardens for other projects. At the 2021 JGI Annual Meeting, David Lowry talked …
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Annual Genomics of Energy & Environment Meeting
Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes this annual gathering of leaders from diverse … to highlight how they are addressing the world’s most pressing energy and environmental challenges.  The invited …
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Disclaimer
NOTICE Information from this server resides on a computer system funded by the U.S. Department of … nor any of their employees, makes any warranty, express or implied, including the warranties of …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and metagenomic data with transcriptomics and proteomics data. …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's lab has been sampling … So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
In honor of the JGI's 25th anniversary in 2022, we have … organisms. As they infect microbes like bacteria, algae and protists, all kinds of viruses impact many ecological … Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along …
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PhycoCosm Tutorial
Learn more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed … of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, Alan Kuo, Sara Calhoun and …
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