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Characterizing Communities: JGI Announces Latest CSP Portfolio
… from Antarctica to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize …
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2024 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are … users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… several UC Merced students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science … and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and …
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Ray Turner Completes Last Tour of Lab Duty at JGI
For the last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, … at a high level as JGI transitioned from the Human Genome Project to gaining momentum as a national user facility. He …
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Natural Prodcast Episode 1: The Primer, Part 1
Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the … in partnering with us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
The  National Ecological Observatory Network (NEON) is a network of … Biological Small-Angle Neutron Scattering (Bio-SANS) instrument available at Oak Ridge National Laboratory  Center … assignable assets program. Q: For a NEON Assignable Assets project, does the data produced become public as well? A:  …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic … of Bacteria and Archaea (GEBA) initiative. “This project has helped to define the current shape of the …
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JGI@25: The Little Alga That Could
In honor of the JGI's 25th anniversary in 2022, we have … a number of notable achievements that showcase our collaborations and capabilities to enable great science that … and published in the journal Science . At the time, the project was co-led by Daniel Rokhsar, head of the JGI’s …
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Identifying the Microbial Cleanup Crew at a Superfund Site
Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, the Environmental Protection … to analyze the resulting metagenomic data. (Data from the project are available on the  JGI Genome Portal .) The team …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
On July 8, JGI’s DNA Synthesis Science group held a  JGI … from an early career perspective, been absolutely instrumental in a lot of the work that we are doing now.” … of the proposals. Upon approval from JGI reviewers, the DOE project managers review the proposals. The proposer of …
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Marine Microbe Contains Multitudes
A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different lifestyles. The … out that, without the JGI, the discoveries made in this project wouldn’t have been possible. Scientists hadn’t known …
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Understanding Wildfire Recovery, Starting in Soil
… after a wildfire. The Science After a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees … DOE Office of Science National User Facilities in a single project. … This work was supported through a USDA NIFA award …
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