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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … This work was supported by the Department of Energy (DOE) Office of Biological and Environmental Research (BER) and is a contribution of the Scientific Focus …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … plants The Science In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model … The work (proposal: award at  … This project received funding from the European Research Council under the European Union’s Horizon 2020 …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … that will help shape all of our futures.” Proposing a Research Experience Benskin wanted to give his high school … The U.S. Department of Energy Joint Genome Institute, a DOE … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in … the CRISPR-Cas9 investigations began as “curiosity driven research.” In the early 2000s, UC Berkeley colleague and … The U.S. Department of Energy Joint Genome Institute, a DOE … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal … The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader analysis than … The project was funded by the U.S. Department of Energy … the 1000 Fungal Genome projects (CSP # 662 & 1974). This research was also supported by the Laboratory of Excellence …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … This work was supported by the U.S. Department of Energy …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks … The field experiment is led by a consortium involving researchers from the University of California (UC), … This research was funded in part by DOE Grant DE-SC0014081 …
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … To ensure the gene editing tool will make the right cut, researchers created a set of guide RNAs that were effective …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate … complex and difficult to sequence and understand. A team of researchers led by Algal Genomics Program lead Igor …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research Division. As a postdoc, her research focused on … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to …
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. … Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, Sarah Hu; [Row … Brittany N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously …
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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … lead author Dominique Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site … This research was supported by grants from the Simons …
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