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IMG Group
… annotation and analysis of (meta)genomic, (meta)transcriptomic, and functional genomic data and serving them to users via the Integrated Microbial Genomes & Microbiomes … and exa- scales on multicore and many core architectures with the ultimate objective of facilitating omics-based …
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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
In the last two episodes, we’ve covered the specialized software and supercomputers behind this project. But every …
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Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient
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Single-cell isotope tracing reveals functional guilds of bacteria associated with the diatom Phaeodactylum tricornutum
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's … been sampling the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few … that giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome assemblies like this …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … livestock — specifically, from the methane-making microbes within their rumen. There is another climate-minded reason … this study, researchers around the world are continuing to build on Hungate 1000 genomes and cultures to work toward a …
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JGI on the 2021 Highly Cited Researchers List
Congratulations to the 2021 Highly Cited Researchers at the JGI! They are … influence in their chosen field or fields through the publication of multiple highly cited papers during the last … multi-institutional research team that combined field data with a reference switchgrass genome to associate climate …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… researchers described how the viruses repeatedly attempted to infect and destroy the host archaea – and how the  … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon … to host Altiarchaea. The team then tracked how Altiarchaea build immunity to viruses. To do so, they compared samples …
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Scaling Up Existing Skill Sets
Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … in fields ranging from plant-microbe interactions to functional genomics. Hear from five of the Summer 2019 … the door for me in the sense that I learned many different tools in bioinformatics research. Also, it consolidated my …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… vigilant stewardship as JGI’s Operations Deputy has come to a close as this previously retired Naval Commander … and it has been especially called on in the move to the new building where that was really critical. It takes a really … of the vision for that building, incorporated that in the design and you oversaw the construction as well as the move …
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A Complex Confection Decoded: Sugarcane Reference Genome
Sugarcane was the last major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts for 80% of global sugar …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From data carpentry to science communications, their schedules were filled with … in Gold Sandra Hernandez Gonzalez and mentor Hualan Liu, Building Expression Host in Bacilli Class using CRAGE …
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