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Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis
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Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for comparing …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & … – DNA sequencing, synthesis, metabolomics, data analysis, and new technology developments – that the JGI … calls on a competitive, peer-reviewed basis to the worldwide scientific community can advance your research goals. …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked … Projects. Each of these entities are curated with a wide range of metadata. GOLD applies a five-level  ecosystem …
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Common bacterial responses in six ecosystems exposed to 10 years of elevated atmospheric carbon dioxide
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Multiple Maize Reference Genomes Impact the Identification of Variants by Genome‐Wide Association Study in a Diverse Inbred Panel
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A User-Centered Approach to Accessing JGI Data
… for users to more easily access public data sets through a common set of metadata. For Steve Wilson, JGI’s Systems … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … metadata criteria. Wilson said that the Data Portal and  Genome Portal will continue to run in parallel for now. …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… archaea and eukaryotes, and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … tree of giant viruses. Metabolic Reprogramming a Common Strategy for Large and Giant Viruses Another …
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Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
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Ben Bowen
… and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s … J., Northen, T., & Bowen, B. (2017). OpenMSI Arrayed Analysis Toolkit: analyzing spatially defined samples using … T., Wang, T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance …
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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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