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A Bioinformatician's Guide to Metagenomics
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Behind the Paper: Hot Springs Metagenomics
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … changes in protein sequences, while others analyzed single point mutations across the genome or changes to the … resources — including the eelgrass genome assembly that enabled analysis of the whole genome duplication event — …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Identification of functional single nucleotide polymorphism of Populus trichocarpa PtrEPSP‐TF and determination of its transcriptional effect
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… By characterizing the structure and function of a methylthio-alkane reductase system, researchers could … Research (BER) program, together with understanding enabled by Basic Energy Sciences (BES) programs, they were … innovation ecosystem. “At JGI, we’ve done the synthesis, metagenome mining, all the way from sequencing to functional …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … species? Or, do they tend to specialize, infecting just a single host? Another wrinkle in the mystery is that viruses … kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses …
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Next generation sequencing and bioinformatic bottlenecks: the current state of metagenomic data analysis
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant representatives of deep subsurface ecosystems. A team of researchers … nitrogen, but the viruses that infect Altiarchaea cause the cells to burst. This action triggers subsurface carbon …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid of two … This work was supported by the Department of Energy (DOE) Office of Science, Biological and …
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High-resolution genetic mapping of allelic variants associated with cell wall chemistry in Populus
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