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… focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to the Human Genome Project, he began developing larger comparative genomic systems as the JGI’s eukaryote … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

… genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal genomics and PhycoCosm portal. Dr. … Acad Sci U S A. 118(18):e2019855118. Miyauchi et al (2020) Large-scale genome sequencing of mycorrhizal fungi provides … … Fungal & Algal Science Program … Education … Selected Publications … Awards and Service …

… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … He was also senior author on a study which identified new genomes highlighting the diversity of white rot fungi in the …

… human chromosomes 5, 16, and 19. Following the completion of the human genome project in 2003, he developed … sequencing of eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …

For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens … stubbornly maintained complete autonomy; they can be isolated and grown separately from each other. A possible …

Survey of Setaria's natural diversity reveals seed dispersal in … a given species).  “This is a great example of developing a large-scale genome infrastructure with a reasonably accessible …

… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … issue of Nature Microbiology , they mined the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained … Washburn Hot Springs in Yellowstone National Park. This large geothermal pool contains high levels of sulfur, …

Miscanthus  sequence offers insights into benefits of polyploidy and … from simpler (and smaller) models,  Miscanthus has a large and complex genome whose evolutionary history and … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will …

… genome . Now, high-quality reference genome sequences of the male and female plants, each representing a single … adapted to conditions such as UV irradiation, heavy metal contamination, and drought. The moss genomes’ metabolic … moss genome, and are almost four times the size of the next largest chromosome. As the study first author Carey put it, …