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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … While are still working on finalizing the tree and related publication the tree is still in development and not … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … that host chemistry and site conditions shape both the taxonomic makeup and functional potential of needle-surface … This research was supported by the National Science Foundation (NSF) …
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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, … through the plant portal  Phytozome . Now the portal offers a way for users to more easily access public data … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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CSP Functional Genomics
… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them … the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All proposals will be externally peer-reviewed for …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field studies … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … U.S. Department of Energy Joint Genome Institute (https:// …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will provide pilot data to assess …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … only about 20% of their fungal species. To make useful comparisons, the researchers had to work outside of …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited … The JGI offers these solutions to the worldwide scientific community through its  User Programs on a competitive, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Richard Fox
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the … Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … Single-Cell Data Viewer Tool   …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… Register here Book your stay at the conference venue This inaugural event will bring together … studies.  This conference is inspired by the vision of standardized fabricated ecosystems (EcoFABs) designed for …
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