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New and Improved: Eucalyptus Reference is Now Accessible
… for the bioeconomy.   The Science Researchers report a new reference genome for eucalyptus in the July edition of the … | Genetics , with significant advances compared to the 2014 Eucalyptus grandis reference genome that has been widely … relied on the E. grandis reference genome published in 2014 by a team led by University of Pretoria scientists with …
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Ecogenomics of Groundwater Phages Suggests Niche Differentiation Linked to Specific Environmental Tolerance
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CRISPR — a widespread system that provides acquired resistance against phages in bacteria and archaea
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Reekeekee- and roodoodooviruses, two different Microviridae clades constituted by the smallest DNA phages
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Animal-associated jumbo phages as widespread and active modulators of gut microbiome ecology and metabolism
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, … J. Doherty, Adrian A. Estrada-Graf, Nicole M. Fernandez; [Row 2]: Zachary Garvin, Chandan Kumar Gautam, Gareth Gillard, … Gonzalez Henao, Yang Hai, Julia G. Harenčár, Sarah Hu; [Row 3]: Lisa Kappel, Gayan Kariyawasam; Ákos T. Kovács. Elina …
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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic … through computational approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  … work also used resources of the National Energy Research Scientific Computing Center (NERSC) , which is supported by …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the JGI-NERSC Engagement Lead with a … Chief Informatics Officer. Click to learn more about how the JGI supports the entire data life cycle through …
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Learning to Look
… approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … work also used resources of the  National Energy Research Scientific Computing Center , another DOE Office of Science … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National … of data with MetaHipMer2. And the National Energy Research Scientific Computing (NERSC) has another supercomputer, …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of giant … In the last thirty years, in environments all over the world, scientists have discovered giants among viruses. Now categorized in their own phylum,  Nucleocytoviricota , …
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Supporting Global Research into Actinomycetes
… of actinobacteria Streptomyces is more than just a funny word. The 500 species described within the group are responsible for roughly two-thirds of … comments. Its purpose is to facilitate open scientific discussions and connect users to one another. The … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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