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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … the natural product galaxy. J Ind Microbiol Biotechnol. 2019 Mar;46(3-4):273-279.   Otani, H., Stogios, P.J, Xu, X., … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Examples: Successful LOIs & Submissions
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine sequencing, DNA …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub … impact the regulation of global nutrient cycles. The JGI’s latest strategic plan (download a copy  here ) … for one field of research can be harnessed elsewhere. In a  2019 paper , the team applied computational methods and …
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Waiting to Respire
… to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined … of UC Berkeley geomicrobiologist Jill Banfield, a longtime JGI collaborator, postdoctoral fellow Paula Matheus … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and research …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct lineage of giant viruses brings a rhodopsin … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for … Hatzenpichler said. “It’s great to collaborate with the JGI because with that, we have a much less biased view into …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … superphylum of extremophilic archaea first outlined by JGI scientists and their collaborators in 2013. While most … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, experimentally …
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Toward More Efficient Artificial Photosynthesis
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA … reviews submissions twice a year. Proposals submitted by July 30, 2020 will be considered in the next review. … This …
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A Step Toward Controlling Soybean Rust
… to counter soybean rust disease. Soybean itself is a  JGI Flagship plant genome , and JGI  published its genome sequence in 2010.       … The U.S. … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s Microbial Genomics Program since 2009 and heads the … Lab’s 2015 Women @ the Lab honorees. Woyke is the second JGI scientist to receive the van Niel Prize; the 2011-2014 …
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