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Computationally Classifying Fungal Lifestyles
… As a proof of concept, researchers developed an algorithm that “taught” a computer how to classify 101 representative … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Dothideomycetes . The data allowed the team to reclassify 25  Dothideomycetes species, and also provides more …
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FICUS Webinar: “Shining a Light: Advanced Photon Source Capabilities for FICUS Research”
… Institute and the Environmental Molecular Sciences Laboratory hosted a webinar to showcase how researchers can gain … National Laboratory when applying to the FY2024 EMSL-JGI FICUS collaborative proposal call . Letters of Intent for the joint call are due March 7, 2024. The …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and Sheree Yao. ] ] The JGI welcomed 14 scientists selected for our 2026 Community … Science Program Large Scale call. This portfolio accelerates bioenergy innovation through genomic discovery across …
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Opening doors to physical sample tracking and attribution in Earth and environmental sciences
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new insights … are easy to point out. Plants, algae and cyanobacteria create the air we breathe and the fuel for food webs as they … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in … resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: 10.1111/nph.18072.   Byline: Ashleigh Papp …
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Genome sequence of the pink–pigmented marine bacterium Loktanella hongkongensis type strain (UST950701–009PT), a representative of the Roseobacter group
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Genome sequence of the Wenxinia marina type strain (DSM 24838T), a representative of the Roseobacter group isolated from oilfield sediments
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A Horizontal Gene Transfer Event Defines Two Distinct Groups within Burkholderia pseudomallei That Have Dissimilar Geographic Distributions▿ †
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Tracking of enzymatic biomass deconstruction by fungal secretomes highlights markers of lignocellulose recalcitrance
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