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Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … class  Dothideomycetes includes fungi that obtain nutrients from decaying organic matter (saprobes), and many plant …

Platform capabilities support researchers exploring how to convert sequence into functional assessments. This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, … platform enables users to validate hypotheses generated from mining genomic data by designing and assembling …

… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … and what they do. Summary The name PhycoCosm stems from the Greek phykos , meaning seaweed. Seaweeds are algae, … where data are available, a user can also analyze gene expression from published experiments; study DNA …

… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … and what they do. Summary The name PhycoCosm stems from the Greek phykos, meaning seaweed. Seaweeds are algae, … where data are available, a user can also analyze gene expression from published experiments; study DNA …

Understanding the shared genetic toolkit of ancestral and present-day plants The … In a recent  Nature Genetics paper , researchers focused on the full composition of genes, or pangenome, of the model … no. DE-AC02-05CH11231. This project received funding from the European Research Council under the European …

Team develops a computational pipeline to sift and characterize RNA virus sequences.  … than 5,000 data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the world, …

… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements … that showcase our collaborations and capabilities to enable great science that will help solve energy and … Over the past 25 years, the JGI has hosted interns from a number of universities and organizations. From field …

Fashioning DNA outside a cell is key to interrogating what genes do, how they work, and applying them to environmental … in the Synthetic Biology special issue, Modular cell-free expression plasmids to accelerate biological design in cells … fostering academia-industry collaborations.” A third story from the issue — Machine learning-based prediction of …

From left to right: [above] Olivia Ahern, Adriana Corales, Hugh Cross, Megan DeMarche, Joanne Emerson, Matthew Hudson, Megan Keller and Julia Kelliher; [below] … large-scale genomic science projects relevant to the DOE’s Office of Biological and Environmental Research (BER) …

Populations of Antarctic lake microbial communities change with the … other Antarctic lakes and the nearby Southern Ocean shift from phototrophs to archaea when sunlight becomes scant, Ace … with light availability. A long-running time-series study offers a first glimpse into a full season’s cycle of this …