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… — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … of four anaerobic fungal species has revealed, for the first time, that this group is unexpectedly powerful: they … the JGI-EMSL Collaborative Science Initiative and used resources at the DOE Joint Genome Institute and the …

… of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. Chen is currently the Microbiome Computational Resource Lead at the JGI, responsible for the data … in an Academic Setting, SSDBM 14, July 2014 … Selected Publications …

… regulation is critical to ensuring genes vital for growth and survival across various environments are … genes associated with a given transcription factor is resource-intensive and unscalable. To test the efficacy of … which Mouncey leads. RIViT-seq is a three-step process. The first step is the in vitro transcription assay. The second …

… virus sequences vary widely. In a previous effort, an international consortium recommended specific … story of the blind men who encounter an elephant for the first time. Based on the single body part each blind man … step, numerous genes for antibiotic resistance and secondary metabolism would have been incorrectly attributed …

… of the Earth’s atmosphere and regulating the global climate for life to flourish. For Guillaume Borrel and Simonetta … Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome data provided by the other … methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” Borrel …

… in the journal  Developmental Cell and provides a community resource that could help researchers track cell development … capabilities for DOE mission questions. One of the  first papers ever applying single-transcriptomics to plant … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …

… are lending their expertise in developing and managing public viral genomics resources such as analytical tools and data repositories to … by NIH Common Fund grant 1U24HL175772-01. This is not the first time Kyrpides and his colleagues have demonstrated how …

… roles in carbon and other nutrient cycles. “This is the first study to take a more global look at giant viruses by … JGI’s  Microbial Program . The team mined more than 8,500 publicly available metagenome datasets generated from … their unicellular hosts,” Schulz added. The work also used resources of the  National Energy Research Scientific …

… genes. The data from that study is now used across California State University campuses for biotechnology education as part of a course-based undergraduate resource experience. Hear from CSU San Marcos Professor Matt …

… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … The knowledge gained from 8X switchgrass is a valuable resource towards the effort to generate climate resilient … use existing data as well as generating additional genomic resources to address long-standing evolutionary ecological …

… and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building … 2023. JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …

For many scientists, the culmination of their work into a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my first publication and it feels so rewarding,” Wint said. For …