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… .) Nayfach also worked with another team on predicting host-virus connections between all viruses in IMG/VR (Virus) and the GEM catalog, associating … KBase has immediate value because people can find the high-quality MAGs and use them to inform future analyses,” said …
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… is an updateable resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio … genome annotations. For that undertaking, new transcriptome datasets are generated through Community Science Program … We will keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene …
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… 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed that 10,727 … Medical Institute. … Sorghum on Phytozome Data Portal … Datasets …
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… to include: A 2021 Nature paper announcing a high-quality reference sequence of the complex switchgrass genome … 2020 Nature Biotechnology paper on the release of the high quality reference genome sequence of green millet ( Setaria …
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… 199 Needham, D.M. et al. 2019. A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine … 1-10 Schulz, F. et al. 2018. Hidden diversity of soil giant viruses. Nature Comm . 9 (1), 4881 Tsementzi, D. et al. …
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… for nearly 600 green millet plants and released a very high quality reference S. viridis genome sequence. Analysis of … hudsonalpha.org. … Reference genome of Setaria viridis … Datasets …
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… sequence and then analyze the genomes and multi-omics datasets for algae that can be used for large-scale …
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… and metabolic potential of the communities studied. The datasets are available on the JGI’s Integrated Microbial …
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… organelles. Science 376:1453 Schulz et al. 2022. Giant virus biology and diversity in the era of genome-resolved … Nature Biotechnology 39, 499-509. Schulz et al. 2020. Giant virus diversity and host interactions through global … Nature Biotechnology 35, 676-683. Schulz et al. 2017. Giant viruses with an expanded complement of translation system …
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… of Texas-Austin. Rambo will be studying the influence of viruses on carbon cycling in coastal mangroves. The work … and temporal scales. Rambo also plans to work with JGI virus researchers and harness the IMG/VR database. “The … who seek to better understand the ecological importance of virus-microbe interactions,” Rambo added. Both Kaze and …
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Program . The comparative framework provided by these high quality reference genome sequences could help researchers …
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… and Microbiomes (IMG/M) system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal …
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