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You Can Move, But You Can’t Hide
… themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the first version of … used computational resources from the Exascale Computing Project (17-SC-20-SC), a collaborative effort of the U.S. …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have … development by Mammoth Biosciences, one of several companies that Doudna has founded. Doudna’s interest in … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron …
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Axel Visel
… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … National Laboratory, he developed and applied novel computational and experimental sequence-based methods for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic …
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Triggering Morel Fruiting
… in China and involving Francis Martin from the Institut National de la Recherche Agronomique (INRA) in France and Igor … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 proposals have been  … through the  CSP New Investigator call . It is the first project to have successfully evolved into a full-scale … range of environments. A similar proposal focused on diatom genomes from  Thomas Mock of the University of East Anglia …
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Soil virus offers insight into maintaining microorganisms
… researchers have identified a virus protein tied to carbon cycling.  The Science Through a collaborative effort, … may promote soil health. The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) … were retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG suite is …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes … in five years, have come out of the JGI-supported project. “The JGI DNA Synthesis Science Program has been … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … proposals have been accepted from 70 full submissions based on 92 letters of intent. Additionally, 40 percent … Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a … from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their talks … support understanding of plants, microbes and environmental communities that have relevance for DOE’s bioenergy and …
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How Filamentous Fungi Sense Food
… of California, Berkeley used a multi-omics approach to reconstruct and model gene regulatory pathways used by the … proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the activity, … enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was also provided …
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New and Improved: Eucalyptus Reference is Now Accessible
… assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference … eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances compared to the 2014 Eucalyptus grandis reference genome …
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Nikos Kyrpides
… lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics … at the University of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on …
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