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Frederik Schulz
… in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. Dr. Schulz employs multi-omics … lake. Microbiome . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how research infrastructure – DNA sequencing, synthesis, … addressed the conference, sharing the journeys of their research careers, and showcasing the broad applications of …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … Through advances in sequencing technologies and computational approaches, more and more virus sequences are being … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced …
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2023 Progress Report
… Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of … data, and professional expertise to support the global research community in studies of complex biological and …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While … sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada (CICESE) in her … graduate students who participated in the Summer 2015 research experience at the JGI as part of an education …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San … can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to … host a  workshop on DOE Biological and Environmental Research (BER) Plant Genomic Science on current and ongoing …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome … Data Collaborative.  This award recognizes distinguished research achievements that support open data practices, … by the DOE Office of Science as part of the Early Career Research Program (ECRP). His project, “Characterizing …
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JGI announces 2023 CSP Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating … of gene and genome function.  Below find a list of the six researchers accepted for 2023. Proposals are accepted …
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Jeremy Schmutz
… working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. There he constructed the pipelines for directed finishing and co-led … DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed …
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Ian Blaby
… Joint Genome Institute, where he leads three groups focused on HTP DNA design and assembly, strain engineering and … development/data analysis for synthetic biology and functional genomics. Prior to joining the JGI, he was a group lead at Brookhaven National Laboratory where he focused on functional genomics of …
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Adopt-A-Genome
… first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar … State Fresno) and two students, Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… Edward Lu and mentor Miguel Romero Sean Saki and mentors  Zhong Wang and Bryce Foster Sivagunalan Thamilarasan and … with team members previously. I think I may keep doing research, but now I think I can lead a team. So maybe I go to industry field, I lead a research team. I think, yeah, that’s maybe one possibility.  …
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